- add model DatasetReference.ts
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- add references inside Creta.vue for Submitter /dataset
- npm updates
- extended enum types
- added relations for Dataset.ts
This commit is contained in:
Kaimbacher 2023-08-01 17:06:51 +02:00
parent 5ce4f0b018
commit f6d735d0fd
10 changed files with 580 additions and 592 deletions

View File

@ -6,6 +6,7 @@ import Project from 'App/Models/Project';
import Title from 'App/Models/Title';
import Description from 'App/Models/Description';
import Language from 'App/Models/Language';
import Coverage from 'App/Models/Coverage';
// import CreateUserValidator from 'App/Validators/CreateUserValidator';
// import UpdateUserValidator from 'App/Validators/UpdateUserValidator';
import { schema, CustomMessages, rules } from '@ioc:Adonis/Core/Validator';
@ -15,8 +16,9 @@ import Database from '@ioc:Adonis/Lucid/Database';
import { TransactionClientContract } from '@ioc:Adonis/Lucid/Database';
import Subject from 'App/Models/Subject';
import CreateDatasetValidator from 'App/Validators/CreateDatasetValidator';
import { TitleTypes, DescriptionTypes, ContributorTypes, PersonNameTypes } from 'Contracts/enums';
import { TitleTypes, DescriptionTypes, ContributorTypes, PersonNameTypes, ReferenceIdentifierTypes, RelationTypes } from 'Contracts/enums';
import type { ModelQueryBuilderContract } from '@ioc:Adonis/Lucid/Orm';
import DatasetReference from 'App/Models/DatasetReference';
export default class DatasetController {
public async index({ auth, request, inertia }: HttpContextContract) {
@ -115,6 +117,10 @@ export default class DatasetController {
.map(([key, value]) => ({ value: key, label: value })),
// descriptiontypes: DescriptionTypes
projects: projects,
referenceIdentifierTypes: Object.entries(ReferenceIdentifierTypes)
.map(([key, value]) => ({ value: key, label: value })),
relationTypes: Object.entries(RelationTypes)
.map(([key, value]) => ({ value: key, label: value })),
});
}
@ -239,6 +245,17 @@ export default class DatasetController {
depth_min: schema.number.optional([rules.requiredIfExists('depth_max')]),
depth_max: schema.number.optional([rules.requiredIfExists('depth_min')]),
}),
references: schema.array([rules.uniqueArray('value')]).members(
schema.object().members({
value: schema.string({ trim: true }, [
rules.minLength(3),
rules.maxLength(255),
]),
type: schema.enum(Object.values(ReferenceIdentifierTypes)),
relation: schema.enum(Object.values(RelationTypes)),
// language: schema.string({ trim: true }, [rules.minLength(2), rules.maxLength(255)]),
}),
),
subjects: schema.array([rules.minLength(3), rules.uniqueArray('value')]).members(
schema.object().members({
value: schema.string({ trim: true }, [
@ -263,6 +280,7 @@ export default class DatasetController {
}
return response.redirect().back();
}
public async store({ auth, request, response, session }: HttpContextContract) {
// node ace make:validator CreateDataset
try {
@ -277,134 +295,15 @@ export default class DatasetController {
throw error;
}
// const user = new User();
// user.email = 'example@example.com';
// user.password = 'password';
// await user.useTransaction(trx).save();
let trx: TransactionClientContract | null = null;
try {
trx = await Database.transaction();
const user = (await User.find(auth.user?.id)) as User;
// const dataset = await user.related('datasets').create({
// type: request.input('type'),
// creatingCorporation: request.input('creating_corporation'),
// language: request.input('language'),
// });
// Create a new instance of the Dataset model:
const dataset = new Dataset();
dataset.type = request.input('type');
dataset.creatingCorporation = request.input('creating_corporation');
dataset.language = request.input('language');
dataset.embargoDate = request.input('embargo_date');
//await dataset.related('user').associate(user); // speichert schon ab
// Dataset.$getRelation('user').boot();
// Dataset.$getRelation('user').setRelated(dataset, user);
// dataset.$setRelated('user', user);
await user.useTransaction(trx).related('datasets').save(dataset);
//store licenses:
const licenses: number[] = request.input('licenses', []);
dataset.useTransaction(trx).related('licenses').sync(licenses);
const authors = request.input('authors', []);
for (const [key, person] of authors.entries()) {
const pivotData = { role: 'author', sort_order: key + 1 };
if (person.id !== undefined) {
await dataset
.useTransaction(trx)
.related('persons')
.attach({
[person.id]: {
role: pivotData.role,
sort_order: pivotData.sort_order,
allow_email_contact: false,
},
});
} else {
const dataPerson = new Person();
// use overwritten fill method
dataPerson.fill(person);
await dataset.useTransaction(trx).related('persons').save(dataPerson, false, {
role: pivotData.role,
sort_order: pivotData.sort_order,
allow_email_contact: false,
});
}
}
const contributors = request.input('contributors', []);
for (const [key, person] of contributors.entries()) {
const pivotData = { role: 'contributor', sort_order: key + 1 };
if (person.id !== undefined) {
await dataset
.useTransaction(trx)
.related('persons')
.attach({
[person.id]: {
role: pivotData.role,
sort_order: pivotData.sort_order,
allow_email_contact: false,
},
});
} else {
const dataPerson = new Person();
// use overwritten fill method
dataPerson.fill(person);
await dataset.useTransaction(trx).related('persons').save(dataPerson, false, {
role: pivotData.role,
sort_order: pivotData.sort_order,
allow_email_contact: false,
});
}
}
//save main and additional titles
const titles = request.input('titles', []);
for (const titleData of titles) {
const title = new Title();
title.value = titleData.value;
title.language = titleData.language;
title.type = titleData.type;
await dataset.useTransaction(trx).related('titles').save(title);
}
//save abstract and additional descriptions
const descriptions = request.input('descriptions', []);
for (const descriptionData of descriptions) {
// $descriptionReference = new Description($description);
// $dataset->abstracts()->save($descriptionReference);
const description = new Description();
description.value = descriptionData.value;
description.language = descriptionData.language;
description.type = descriptionData.type;
await dataset.useTransaction(trx).related('descriptions').save(description);
}
//save keywords
const keywords = request.input('subjects', []);
for (const keywordData of keywords) {
// $dataKeyword = new Subject($keyword);
// $dataset->subjects()->save($dataKeyword);
const keyword = await Subject.firstOrNew({ value: keywordData.value, type: keywordData.type }, keywordData);
if (keyword.$isNew === true) {
await dataset.useTransaction(trx).related('subjects').save(keyword);
} else {
await dataset.useTransaction(trx).related('subjects').attach([keyword.id]);
}
}
// Dataset.$getRelation('persons').boot();
// Dataset.$getRelation('persons').pushRelated(dataset, person)
// dataset.$pushRelated('persons', person);
await this.createDatasetAndAssociations(user, request, trx);
await trx.commit();
console.log('Users and posts created successfully');
console.log('Dataset and related models created successfully');
} catch (error) {
if (trx !== null) {
await trx.rollback();
@ -425,8 +324,6 @@ export default class DatasetController {
// fieldName: 'file'
// size: 135624
//const datasetFolder = 'files/' . dataset->id;
// await coverImage.moveToDisk('./')
await coverImage.moveToDisk(
'/test_dataset2',
@ -444,6 +341,110 @@ export default class DatasetController {
return response.redirect().back();
}
private async createDatasetAndAssociations(user: User, request: HttpContextContract['request'], trx: TransactionClientContract) {
// Create a new instance of the Dataset model:
const dataset = new Dataset();
dataset.type = request.input('type');
dataset.creatingCorporation = request.input('creating_corporation');
dataset.language = request.input('language');
dataset.embargoDate = request.input('embargo_date');
//await dataset.related('user').associate(user); // speichert schon ab
// Dataset.$getRelation('user').boot();
// Dataset.$getRelation('user').setRelated(dataset, user);
// dataset.$setRelated('user', user);
await user.useTransaction(trx).related('datasets').save(dataset);
//store licenses:
const licenses: number[] = request.input('licenses', []);
dataset.useTransaction(trx).related('licenses').sync(licenses);
// save authors and contributors
await this.savePersons(dataset, request.input('authors', []), 'author', trx);
await this.savePersons(dataset, request.input('contributors', []), 'contributor', trx);
//save main and additional titles
const titles = request.input('titles', []);
for (const titleData of titles) {
const title = new Title();
title.value = titleData.value;
title.language = titleData.language;
title.type = titleData.type;
await dataset.useTransaction(trx).related('titles').save(title);
}
// save descriptions
const descriptions = request.input('descriptions', []);
for (const descriptionData of descriptions) {
const description = new Description();
description.value = descriptionData.value;
description.language = descriptionData.language;
description.type = descriptionData.type;
await dataset.useTransaction(trx).related('descriptions').save(description);
}
//save references
const references = request.input('references', []);
for (const referencePayload of references) {
const dataReference = new DatasetReference();
dataReference.fill(referencePayload);
// $dataReference = new DatasetReference($reference);
dataset.related('references').save(dataReference);
}
//save keywords
const keywords = request.input('subjects', []);
for (const keywordData of keywords) {
// $dataKeyword = new Subject($keyword);
// $dataset->subjects()->save($dataKeyword);
const keyword = await Subject.firstOrNew({ value: keywordData.value, type: keywordData.type }, keywordData);
if (keyword.$isNew === true) {
await dataset.useTransaction(trx).related('subjects').save(keyword);
} else {
await dataset.useTransaction(trx).related('subjects').attach([keyword.id]);
}
}
// save coverage
const coverageData = request.input('coverage');
if (coverageData) {
// const formCoverage = request.input('coverage');
const coverage = new Coverage();
coverage.fill(coverageData);
// await dataset.coverage().save(coverageData);
await dataset.useTransaction(trx).related('coverage').save(coverage);
// Alternatively, you can associate the dataset with the coverage and then save it:
// await coverage.dataset().associate(dataset).save();
// await coverage.useTransaction(trx).related('dataset').associate(dataset);
}
}
private async savePersons(dataset: Dataset, persons: any[], role: string, trx: TransactionClientContract) {
for (const [key, person] of persons.entries()) {
const pivotData = { role: role, sort_order: key + 1 };
if (person.id !== undefined) {
await dataset
.useTransaction(trx)
.related('persons')
.attach({
[person.id]: {
role: pivotData.role,
sort_order: pivotData.sort_order,
allow_email_contact: false,
},
});
} else {
const dataPerson = new Person();
dataPerson.fill(person);
await dataset.useTransaction(trx).related('persons').save(dataPerson, false, {
role: pivotData.role,
sort_order: pivotData.sort_order,
allow_email_contact: false,
});
}
}
}
public messages: CustomMessages = {
'minLength': '{{ field }} must be at least {{ options.minLength }} characters long',
'maxLength': '{{ field }} must be less then {{ options.maxLength }} characters long',

View File

@ -7,6 +7,21 @@ export default class Coverage extends BaseModel {
public static primaryKey = 'id';
public static table = 'coverage';
public static selfAssignPrimaryKey = false;
public static fillable: string[] = [
'elevation_min',
'elevation_max',
'elevation_absolut',
'depth_min',
'depth_max',
'depth_absolut',
'time_min',
'time_max',
'time_absolut',
'x_min',
'x_max',
'y_min',
'y_max',
];
@column({
isPrimary: true,

View File

@ -22,6 +22,7 @@ import License from './License';
import Subject from './Subject';
import File from './File';
import Coverage from './Coverage';
import DatasetReference from './DatasetReference';
export default class Dataset extends BaseModel {
public static namingStrategy = new SnakeCaseNamingStrategy();
@ -138,6 +139,11 @@ export default class Dataset extends BaseModel {
})
public coverage: HasOne<typeof Coverage>;
@hasMany(() => DatasetReference, {
foreignKey: 'document_id',
})
public references: HasMany<typeof DatasetReference>;
@computed({
serializeAs: 'main_title',

View File

@ -0,0 +1,49 @@
import { column, BaseModel, SnakeCaseNamingStrategy, belongsTo, BelongsTo } from '@ioc:Adonis/Lucid/Orm';
import { DateTime } from 'luxon';
import Dataset from './Dataset';
export default class DatasetReference extends BaseModel {
public static namingStrategy = new SnakeCaseNamingStrategy();
public static primaryKey = 'id';
public static table = 'document_references';
public static fillable: string[] = ['value', 'label', 'type', 'relation'];
@column({
isPrimary: true,
})
public id: number;
@column({})
public document_id: number;
@column({})
public related_document_id?: number;
@column({})
public type: string;
@column({})
public relation: string;
@column({})
public value: string;
@column({})
public label: string;
@column.dateTime({
autoCreate: true,
})
public created_at?: DateTime;
@column.dateTime({
autoCreate: true,
autoUpdate: true,
})
public updated_at?: DateTime;
@belongsTo(() => Dataset, {
foreignKey: 'document_id',
})
public dataset: BelongsTo<typeof Dataset>;
}

View File

@ -1,7 +1,7 @@
import { schema, CustomMessages, rules } from '@ioc:Adonis/Core/Validator';
import type { HttpContextContract } from '@ioc:Adonis/Core/HttpContext';
import dayjs from 'dayjs';
import { TitleTypes, DescriptionTypes } from 'Contracts/enums';
import { TitleTypes, DescriptionTypes, RelationTypes, ReferenceIdentifierTypes } from 'Contracts/enums';
export default class CreateDatasetValidator {
constructor(protected ctx: HttpContextContract) {}
@ -73,6 +73,17 @@ export default class CreateDatasetValidator {
depth_min: schema.number.optional([rules.requiredIfExists('depth_max')]),
depth_max: schema.number.optional([rules.requiredIfExists('depth_min')]),
}),
references: schema.array([rules.uniqueArray('value')]).members(
schema.object().members({
value: schema.string({ trim: true }, [
rules.minLength(3),
rules.maxLength(255),
]),
type: schema.enum(Object.values(ReferenceIdentifierTypes)),
relation: schema.enum(Object.values(RelationTypes)),
// language: schema.string({ trim: true }, [rules.minLength(2), rules.maxLength(255)]),
}),
),
subjects: schema.array([rules.minLength(3), rules.uniqueArray('value')]).members(
schema.object().members({
value: schema.string({ trim: true }, [

View File

@ -79,3 +79,24 @@ export enum ContributorTypes {
export enum SubjectTypes {
uncontrolled = 'uncontrolled',
}
export enum ReferenceIdentifierTypes {
DOI = 'DOI',
Handle = 'Handle',
ISBN = 'ISBN',
ISSN = 'ISSN',
URL = 'URL',
URN = 'URN',
}
export enum RelationTypes {
IsSupplementTo = 'IsSupplementTo',
IsSupplementedBy = 'IsSupplementedBy',
IsContinuedBy = 'IsContinuedBy',
Continues = 'Continues',
IsNewVersionOf = 'IsNewVersionOf',
IsPartOf = 'IsPartOf',
HasPart = 'HasPart',
Compiles = 'Compiles',
IsVariantFormOf = 'IsVariantFormOf',
}

102
package-lock.json generated
View File

@ -33,7 +33,6 @@
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"vue-facing-decorator": "^2.1.13",
"vuedraggable": "^4.1.0",
"xmlbuilder2": "^3.1.1"
},
@ -74,6 +73,7 @@
"ts-loader": "^9.4.2",
"typescript": "^5.1.3",
"vue": "^3.2.47",
"vue-facing-decorator": "^3.0.0",
"vue-loader": "^17.0.1",
"xslt3": "^2.5.0",
"youch": "^3.2.0",
@ -2699,9 +2699,9 @@
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@ -2767,9 +2767,9 @@
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@ -4168,9 +4168,9 @@
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@ -5864,9 +5864,9 @@
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@ -5883,9 +5883,9 @@
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@ -6081,9 +6081,9 @@
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@ -7950,9 +7950,9 @@
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@ -8011,9 +8011,9 @@
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@ -8101,27 +8101,27 @@
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@ -8212,9 +8212,9 @@
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"node_modules/eslint-scope": {
"version": "7.2.1",
"resolved": "https://registry.npmjs.org/eslint-scope/-/eslint-scope-7.2.1.tgz",
"integrity": "sha512-CvefSOsDdaYYvxChovdrPo/ZGt8d5lrJWleAc1diXRKhHGiTYEI26cvo8Kle/wGnsizoCJjK73FMg1/IkIwiNA==",
"version": "7.2.2",
"resolved": "https://registry.npmjs.org/eslint-scope/-/eslint-scope-7.2.2.tgz",
"integrity": "sha512-dOt21O7lTMhDM+X9mB4GX+DZrZtCUJPL/wlcTqxyrx5IvO0IYtILdtrQGQp+8n5S0gwSVmOf9NQrjMOgfQZlIg==",
"dev": true,
"dependencies": {
"esrecurse": "^4.3.0",
@ -8228,9 +8228,9 @@
}
},
"node_modules/eslint-visitor-keys": {
"version": "3.4.1",
"resolved": "https://registry.npmjs.org/eslint-visitor-keys/-/eslint-visitor-keys-3.4.1.tgz",
"integrity": "sha512-pZnmmLwYzf+kWaM/Qgrvpen51upAktaaiI01nsJD/Yr3lMOdNtq0cxkrrg16w64VtisN6okbs7Q8AfGqj4c9fA==",
"version": "3.4.2",
"resolved": "https://registry.npmjs.org/eslint-visitor-keys/-/eslint-visitor-keys-3.4.2.tgz",
"integrity": "sha512-8drBzUEyZ2llkpCA67iYrgEssKDUu68V8ChqqOfFupIaG/LCVPUT+CoGJpT77zJprs4T/W7p07LP7zAIMuweVw==",
"dev": true,
"engines": {
"node": "^12.22.0 || ^14.17.0 || >=16.0.0"
@ -12710,13 +12710,13 @@
}
},
"node_modules/pg": {
"version": "8.11.1",
"resolved": "https://registry.npmjs.org/pg/-/pg-8.11.1.tgz",
"integrity": "sha512-utdq2obft07MxaDg0zBJI+l/M3mBRfIpEN3iSemsz0G5F2/VXx+XzqF4oxrbIZXQxt2AZzIUzyVg/YM6xOP/WQ==",
"version": "8.11.2",
"resolved": "https://registry.npmjs.org/pg/-/pg-8.11.2.tgz",
"integrity": "sha512-l4rmVeV8qTIrrPrIR3kZQqBgSN93331s9i6wiUiLOSk0Q7PmUxZD/m1rQI622l3NfqBby9Ar5PABfS/SulfieQ==",
"dependencies": {
"buffer-writer": "2.0.0",
"packet-reader": "1.0.0",
"pg-connection-string": "^2.6.1",
"pg-connection-string": "^2.6.2",
"pg-pool": "^3.6.1",
"pg-protocol": "^1.6.0",
"pg-types": "^2.1.0",
@ -12784,6 +12784,11 @@
"node": ">=4"
}
},
"node_modules/pg/node_modules/pg-connection-string": {
"version": "2.6.2",
"resolved": "https://registry.npmjs.org/pg-connection-string/-/pg-connection-string-2.6.2.tgz",
"integrity": "sha512-ch6OwaeaPYcova4kKZ15sbJ2hKb/VP48ZD2gE7i1J+L4MspCtBMAx8nMgz7bksc7IojCIIWuEhHibSMFH8m8oA=="
},
"node_modules/pgpass": {
"version": "1.0.5",
"resolved": "https://registry.npmjs.org/pgpass/-/pgpass-1.0.5.tgz",
@ -16716,9 +16721,10 @@
}
},
"node_modules/vue-facing-decorator": {
"version": "2.1.20",
"resolved": "https://registry.npmjs.org/vue-facing-decorator/-/vue-facing-decorator-2.1.20.tgz",
"integrity": "sha512-Xv987Q+XhhWTPXxzG4HllHxckMahV04wDcRebdd/AWlU/hYm7+tGRo2eD84mpl3rZLZQ74Cr41UlWbGbEQptNA==",
"version": "3.0.0",
"resolved": "https://registry.npmjs.org/vue-facing-decorator/-/vue-facing-decorator-3.0.0.tgz",
"integrity": "sha512-NnbFHlJCYzQv8Mx9ehm486NLxidx/KeqbSDgi4V9kLXakLIijzLHqRWMpuEWW4hsQFxRh3bTtPCTCZMP2OL+4Q==",
"dev": true,
"peerDependencies": {
"vue": "^3.0.0"
}

View File

@ -55,6 +55,7 @@
"ts-loader": "^9.4.2",
"typescript": "^5.1.3",
"vue": "^3.2.47",
"vue-facing-decorator": "^3.0.0",
"vue-loader": "^17.0.1",
"xslt3": "^2.5.0",
"youch": "^3.2.0",
@ -86,7 +87,6 @@
"reflect-metadata": "^0.1.13",
"saxon-js": "^2.5.0",
"source-map-support": "^0.5.21",
"vue-facing-decorator": "^2.1.13",
"vuedraggable": "^4.1.0",
"xmlbuilder2": "^3.1.1"
}

View File

@ -11,6 +11,7 @@ export interface Dataset {
| number
| (IErrorMessage | undefined)
| Coverage
| Array<DatasetReference>
| Array<File>;
language: Ref<string>;
// licenses: Array<number>;
@ -27,6 +28,7 @@ export interface Dataset {
errors?: IErrorMessage;
// async (user): Promise<void>;
subjects: Array<Subject>;
references: Array<DatasetReference>;
files: Array<TestFile> | undefined;
// upload: TethysFile
}
@ -53,6 +55,13 @@ export interface Subject {
value: string;
external_key?: string;
}
export interface DatasetReference {
// id: number;
value: string;
label: string;
type: string;
relation: string;
}
export interface Title {
value: string;

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